Data download

Single Cell References

ExpressionSet

• Single cell RNA-seq data of pancreatic islets from healthy individuals (Segerstolpe et al.)
• Single cell RNA-seq data of pancreatic islet from healthy and diseased individuals(Xin et al.)
• Subset of single cell RNA-seq data of mouse kidney (Park et al.)

SingleCellExperiment

• Single cell RNA-seq data of pancreatic islets from healthy individuals (Segerstolpe et al.)
• Single cell RNA-seq data of pancreatic islet from healthy and diseased individuals(Xin et al.)
• Subset of single cell RNA-seq data of mouse kidney (Park et al.)

Bulk Expression

• Processed RNA-seq data from bulk pancreatic islets in healthy and hyperglycemic individuals (Fadista et al.)
• Processed RNA-seq data from bulk kidney in healthy and APOL1 mouse (Beckerman et al.)

Simulated Bulk Expression

• Simulated benchmark bulk RNA-seq data of pancreatic islets in healthy and T2D individuals.
• True cell type proportions of the simulation

Cluster marker genes for Mouse model

• Selected genes for recursive estimation in mouse kidney analysis